Sequence Similarity Clusters for the Entities in PDB 1D5T

Entity #1 | Chains: A
GUANINE NUCLEOTIDE DISSOCIATION INHIBITOR protein, length: 433 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53278
95 % 1 3 21972 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 3 21341
70 % 1 3 19592
50 % 1 9 5763
40 % 1 9 5413
30 % 1 9 4850

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures