Sequence Similarity Clusters for the Entities in PDB 1D5S

Entity #1 | Chains: A
P1-ARG ANTITRYPSIN protein, length: 334 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 14836
95 % 19 26 1955 Flexibility: Medium
Max RMSD: 17.3, Avg RMSD: 4.9
PDBFlex
90 % 19 26 2002
70 % 19 26 2023
50 % 41 48 888
40 % 84 97 378
30 % 151 178 183
Entity #2 | Chains: B
P1-ARG ANTITRYPSIN protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 74026
95 % 2 2 36834 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 2 2 35176
70 % 2 2 31276
50 % 2 2 26754
40 % 2 2 23637
30 % 2 2 20094

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.