Sequence Similarity Clusters for the Entities in PDB 1D5N

Entity #1 | Chains: A,B,C,D
PROTEIN (MANGANESE SUPEROXIDE DISMUTASE) protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 2783
95 % 5 13 1221 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.4
PDBFlex
90 % 5 13 1251
70 % 5 13 1284
50 % 16 115 133
40 % 18 338 124
30 % 18 132 132

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.