Sequence Similarity Clusters for the Entities in PDB 1D5I

Entity #1 | Chains: L
CHIMERIC GERMLINE PRECURSOR OF OXY-COPE CATALYTIC ANTIBODY AZ-28 (LIGHT CHAIN) protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 24018
95 % 1 4 13907 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.9
PDBFlex
90 % 1 4 13662
70 % 680 2538 1
50 % 1399 5152 1
40 % 1639 5806 1
30 % 2008 7240 1
Entity #2 | Chains: H
CHIMERIC GERMLINE PRECURSOR OF OXY-COPE CATALYTIC ANTIBODY AZ-28 (HEAVY CHAIN) protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 44202
95 % 1 4 12259 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 2.9
PDBFlex
90 % 4 9 6259
70 % 673 2497 2
50 % 1400 5152 1
40 % 1640 5806 1
30 % 2009 7240 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures