Sequence Similarity Clusters for the Entities in PDB 1D5I

Entity #1 | Chains: L
CHIMERIC GERMLINE PRECURSOR OF OXY-COPE CATALYTIC ANTIBODY AZ-28 (LIGHT CHAIN) protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 41144
95 % 1 4 12470
90 % 1 4 12264
70 % 617 2327 1
50 % 1265 4713 1
40 % 1265 4713 1
30 % 1412 5567 1
Entity #2 | Chains: H
CHIMERIC GERMLINE PRECURSOR OF OXY-COPE CATALYTIC ANTIBODY AZ-28 (HEAVY CHAIN) protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40134
95 % 1 4 12385 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 2.9
PDBFlex
90 % 4 9 5793
70 % 609 2280 2
50 % 1266 4713 1
40 % 1266 4713 1
30 % 1413 5567 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.