Sequence Similarity Clusters for the Entities in PDB 1D5G

Entity #1 | Chains: A
HUMAN PHOSPHATASE HPTP1E protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 7605
95 % 6 7 6191
90 % 9 10 4599
70 % 9 10 4512
50 % 9 10 4334
40 % 188 191 157
30 % 299 302 111
Entity #2 | Chains: B
PEPTIDE FADSEADENEQVSAV protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures