Sequence Similarity Clusters for the Entities in PDB 1D5G

Entity #1 | Chains: A
HUMAN PHOSPHATASE HPTP1E protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 7779
95 % 6 7 6318
90 % 9 10 4717
70 % 9 10 4620
50 % 9 10 4427
40 % 191 194 159
30 % 305 308 111
Entity #2 | Chains: B
PEPTIDE FADSEADENEQVSAV protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures