Sequence Similarity Clusters for the Entities in PDB 1D5F

Entity #1 | Chains: A,B,C
E6AP HECT CATALYTIC DOMAIN, E3 LIGASE protein, length: 358 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 12146
95 % 2 2 11875 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 2 2 11714
70 % 2 2 11076
50 % 2 2 9972
40 % 2 2 9087
30 % 17 22 1701

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures