Sequence Similarity Clusters for the Entities in PDB 1D5F

Entity #1 | Chains: A,B,C
E6AP HECT CATALYTIC DOMAIN, E3 LIGASE protein, length: 358 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 11912
95 % 2 2 11663 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 2 2 11504
70 % 2 2 10877
50 % 2 2 9795
40 % 2 2 8930
30 % 17 22 1658

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.