Sequence Similarity Clusters for the Entities in PDB 1D5D

Entity #1 | Chains: A
S PEPTIDE protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
RNASE S protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 29 1336
95 % 19 29 1784
90 % 19 29 1825
70 % 19 29 1850
50 % 19 29 1885
40 % 19 29 1882
30 % 19 29 1813

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures