Sequence Similarity Clusters for the Entities in PDB 1D4X

Entity #1 | Chains: A
C. ELEGANS ACTIN 1/3 protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53774
95 % 36 179 15 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.0
PDBFlex
90 % 36 184 16
70 % 38 189 23
50 % 38 192 36
40 % 38 211 41
30 % 38 231 54
Entity #2 | Chains: G
GELSOLIN protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 15 3049
95 % 7 28 1911 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 7 28 1955
70 % 7 28 1981
50 % 7 28 1987
40 % 7 28 1979
30 % 7 28 1906

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.