Sequence Similarity Clusters for the Entities in PDB 1D4X

Entity #1 | Chains: A
C. ELEGANS ACTIN 1/3 protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52300
95 % 36 176 15 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.0
PDBFlex
90 % 36 181 16
70 % 38 185 24
50 % 38 187 38
40 % 38 206 46
30 % 38 226 52
Entity #2 | Chains: G
GELSOLIN protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 13 3554
95 % 7 26 2039 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 7 26 2092
70 % 7 26 2091
50 % 7 26 2073
40 % 7 26 2061
30 % 7 26 1983

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.