Sequence Similarity Clusters for the Entities in PDB 1D4X

Entity #1 | Chains: A
C. ELEGANS ACTIN 1/3 protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54857
95 % 36 197 8 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.0
PDBFlex
90 % 36 202 10
70 % 38 207 11
50 % 38 214 15
40 % 38 233 23
30 % 38 253 36
Entity #2 | Chains: G
GELSOLIN protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 16 2993
95 % 7 29 1853 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 7 29 1894
70 % 7 29 1927
50 % 7 29 1944
40 % 7 29 1950
30 % 7 29 1879

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures