Sequence Similarity Clusters for the Entities in PDB 1D4W

Entity #1 | Chains: A,B
T CELL SIGNAL TRANSDUCTION MOLECULE SAP protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 9548
95 % 3 4 9628 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.9
PDBFlex
90 % 3 4 9520
70 % 3 4 9048
50 % 3 4 8188
40 % 27 134 222
30 % 39 228 153
Entity #2 | Chains: C,D
SIGNALING LYMPHOCYTIC ACTIVATION MOLECULE protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.