Sequence Similarity Clusters for the Entities in PDB 1D4P

Entity #1 | Chains: A
ALPHA-THROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 193 335 45
95 % 193 336 60
90 % 193 336 65
70 % 193 338 76
50 % 193 338 101
40 % 193 338 125
30 % 193 338 137
Entity #2 | Chains: B
ALPHA-THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 172 290 55
95 % 212 374 35
90 % 214 381 38
70 % 214 405 44
50 % 214 405 78
40 % 1090 1684 4
30 % 1174 1833 6
Entity #3 | Chains: H
HIRUGEN protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.