Sequence Similarity Clusters for the Entities in PDB 1D4N

Entity #1 | Chains: A
TRANSFERRIN protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 55861
95 % 7 21 1620 Flexibility: Low
Max RMSD: 6.9, Avg RMSD: 2.6
PDBFlex
90 % 7 21 1652
70 % 7 22 1623
50 % 9 37 1109
40 % 34 116 426
30 % 34 116 430

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures