Sequence Similarity Clusters for the Entities in PDB 1D4M

Entity #1 | Chains: 1
PROTEIN (COXSACKIEVIRUS A9) protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58062
95 % 1 1 41498
90 % 1 1 39600
70 % 1 7 10047
50 % 1 14 4604
40 % 17 160 279
30 % 17 160 293
Entity #2 | Chains: 2
PROTEIN (COXSACKIEVIRUS A9) protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 39376
95 % 1 2 30488
90 % 1 2 29400
70 % 1 15 4519
50 % 16 160 338
40 % 16 160 353
30 % 26 195 169
Entity #3 | Chains: 3
PROTEIN (COXSACKIEVIRUS A9) protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 40484
95 % 1 2 31103
90 % 1 2 29987
70 % 1 15 4529
50 % 17 169 247
40 % 17 171 262
30 % 27 210 153
Entity #4 | Chains: 4
PROTEIN (COXSACKIEVIRUS A9) protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74440
95 % 1 1 51593
90 % 1 12 6370
70 % 7 87 591
50 % 15 122 452
40 % 15 123 477
30 % 15 123 470

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures