Sequence Similarity Clusters for the Entities in PDB 1D4M

Entity #1 | Chains: 1
PROTEIN (COXSACKIEVIRUS A9) protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57397
95 % 1 1 41032
90 % 1 1 39170
70 % 1 7 9899
50 % 1 14 4546
40 % 17 160 278
30 % 17 160 290
Entity #2 | Chains: 2
PROTEIN (COXSACKIEVIRUS A9) protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 38906
95 % 1 2 30132
90 % 1 2 29065
70 % 1 15 4460
50 % 16 160 320
40 % 16 160 333
30 % 26 195 168
Entity #3 | Chains: 3
PROTEIN (COXSACKIEVIRUS A9) protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 40000
95 % 1 2 30741
90 % 1 2 29648
70 % 1 15 4470
50 % 17 169 247
40 % 17 171 262
30 % 27 210 151
Entity #4 | Chains: 4
PROTEIN (COXSACKIEVIRUS A9) protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73623
95 % 1 1 51041
90 % 1 12 6280
70 % 7 87 578
50 % 15 122 446
40 % 15 123 471
30 % 15 123 464

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures