Sequence Similarity Clusters for the Entities in PDB 1D4E

Entity #1 | Chains: A
FLAVOCYTOCHROME C FUMARATE REDUCTASE protein, length: 572 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 12405
95 % 3 3 11894 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 3 3 11725
70 % 3 3 11079
50 % 18 18 2316
40 % 19 19 2096
30 % 19 19 1981

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures