Sequence Similarity Clusters for the Entities in PDB 1D3T

Entity #1 | Chains: A
ALPHA-THROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 306 329 44
95 % 307 330 60
90 % 307 330 65
70 % 308 332 76
50 % 308 332 101
40 % 308 332 125
30 % 308 332 136
Entity #2 | Chains: B
ALPHA-THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 265 284 55
95 % 342 368 37
90 % 347 375 38
70 % 364 399 44
50 % 364 399 78
40 % 1496 1623 4
30 % 1619 1765 6
Entity #3 | Chains: H
HIRUGEN protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.