Sequence Similarity Clusters for the Entities in PDB 1D3Q

Entity #1 | Chains: A
ALPHA-THROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 300 331 44
95 % 301 332 60
90 % 301 332 65
70 % 302 334 77
50 % 302 334 101
40 % 302 334 125
30 % 302 334 137
Entity #2 | Chains: B
ALPHA-THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 260 286 55
95 % 335 370 36
90 % 340 377 38
70 % 357 401 44
50 % 357 401 78
40 % 1475 1635 4
30 % 1594 1777 6
Entity #3 | Chains: H
HIRUGEN protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.