Sequence Similarity Clusters for the Entities in PDB 1D3P

Entity #1 | Chains: A
ALPHA-THROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 190 329 44
95 % 190 330 60
90 % 190 330 65
70 % 190 332 76
50 % 190 332 100
40 % 190 332 124
30 % 190 332 136
Entity #2 | Chains: B
ALPHA-THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 169 284 55
95 % 209 368 37
90 % 211 375 38
70 % 211 399 44
50 % 211 399 77
40 % 1050 1618 4
30 % 1136 1760 6
Entity #3 | Chains: H
HIRUGEN protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.