Sequence Similarity Clusters for the Entities in PDB 1D3L

Entity #1 | Chains: A
PROTEIN (INTERCELLULAR ADHESION MOLECULE-1) protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 13160
95 % 4 6 10566 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.5
PDBFlex
90 % 4 6 10423
70 % 4 6 9892
50 % 4 6 8971
40 % 5 7 7383
30 % 6 8 5774

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.