Sequence Similarity Clusters for the Entities in PDB 1D3D

Entity #1 | Chains: A
ALPHA-THROMBIN protein, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 174 335 45
95 % 174 336 60
90 % 174 336 65
70 % 174 338 76
50 % 174 338 101
40 % 174 338 125
30 % 174 338 137
Entity #2 | Chains: B
ALPHA-THROMBIN protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 153 290 55
95 % 190 374 35
90 % 191 381 38
70 % 191 405 44
50 % 191 405 78
40 % 1017 1684 4
30 % 1093 1833 6
Entity #3 | Chains: H
HIRUGEN protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.