Sequence Similarity Clusters for the Entities in PDB 1D3D

Entity #1 | Chains: A
ALPHA-THROMBIN protein, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 168 328 42
95 % 168 329 57
90 % 168 329 62
70 % 168 331 71
50 % 168 331 95
40 % 168 331 120
30 % 168 331 132
Entity #2 | Chains: B
ALPHA-THROMBIN protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 147 283 51
95 % 184 367 33
90 % 185 374 35
70 % 185 398 40
50 % 185 398 70
40 % 957 1605 4
30 % 1033 1747 6
Entity #3 | Chains: H
HIRUGEN protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.