Sequence Similarity Clusters for the Entities in PDB 1D3A

Entity #1 | Chains: A,B
HALOPHILIC MALATE DEHYDROGENASE protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 2528
95 % 8 9 2119 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.4
PDBFlex
90 % 8 9 2171
70 % 9 10 1826
50 % 9 10 1862
40 % 9 10 1869
30 % 216 228 42

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures