Sequence Similarity Clusters for the Entities in PDB 1D3A

Entity #1 | Chains: A,B
HALOPHILIC MALATE DEHYDROGENASE protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 7216
95 % 8 9 2192 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.4
PDBFlex
90 % 8 9 2243
70 % 9 10 1876
50 % 9 10 1914
40 % 9 10 1906
30 % 219 231 44

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures