Sequence Similarity Clusters for the Entities in PDB 1D2Z

Entity #1 | Chains: A,C
DEATH DOMAIN OF PELLE protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 15908
95 % 1 3 14915 Flexibility: High
Max RMSD: 15.4, Avg RMSD: 10.2
PDBFlex
90 % 1 3 14641
70 % 1 3 13710
50 % 1 3 12173
40 % 1 3 11041
30 % 1 3 9587
Entity #2 | Chains: B,D
DEATH DOMAIN OF TUBE protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43806
95 % 1 1 33073 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 1 31627
70 % 1 1 28223
50 % 1 1 24078
40 % 1 1 21187
30 % 1 1 17955

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.