Sequence Similarity Clusters for the Entities in PDB 1D2V

Entity #1 | Chains: A,B
MYELOPEROXIDASE protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 16 1263
95 % 6 16 1506 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 6 16 1531
70 % 6 16 1544
50 % 6 16 1594
40 % 6 16 1583
30 % 6 16 1570
Entity #2 | Chains: C,D
MYELOPEROXIDASE protein, length: 466 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 16 1262
95 % 6 16 1505 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 6 16 1530
70 % 6 16 1543
50 % 6 16 1593
40 % 6 16 1582
30 % 6 16 1569

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures