Sequence Similarity Clusters for the Entities in PDB 1D2U

Entity #1 | Chains: A
NITROPHORIN 4 protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 29 1458
95 % 24 48 1024 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 24 54 827
70 % 24 54 864
50 % 24 54 920
40 % 25 74 682
30 % 25 77 563

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.