Sequence Similarity Clusters for the Entities in PDB 1D2R

Entity #1 | Chains: A,B,C,D,E,F
PROTEIN (TRYPTOPHANYL TRNA SYNTHETASE) protein, length: 326 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 11970
95 % 12 12 1038 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.1
PDBFlex
90 % 13 13 990
70 % 13 13 1029
50 % 16 16 976
40 % 26 27 679
30 % 27 28 635

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.