Sequence Similarity Clusters for the Entities in PDB 1D2Q

Entity #1 | Chains: A,B
TNF-RELATED APOPTOSIS INDUCING LIGAND protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 2783
95 % 5 6 3478 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.3
PDBFlex
90 % 5 6 3526
70 % 5 6 3473
50 % 5 6 3391
40 % 5 6 3282
30 % 14 15 1630

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.