Sequence Similarity Clusters for the Entities in PDB 1D2O

Entity #1 | Chains: A,B
COLLAGEN ADHESIN protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32565
95 % 1 1 26711 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 25757
70 % 1 1 23310
50 % 1 1 21026
40 % 1 1 18557
30 % 1 1 14803

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures