Sequence Similarity Clusters for the Entities in PDB 1D2O

Entity #1 | Chains: A,B
COLLAGEN ADHESIN protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41955
95 % 1 1 31823 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 30442
70 % 1 1 27211
50 % 1 1 23225
40 % 1 1 20436
30 % 1 1 17310

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.