Sequence Similarity Clusters for the Entities in PDB 1D2J

Entity #1 | Chains: A
LOW-DENSITY LIPOPROTEIN RECEPTOR protein, length: 40 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69858
95 % 2 2 34617
90 % 2 2 33127
70 % 2 2 29615
50 % 2 2 25419
40 % 2 2 22472
30 % 2 2 19099

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.