Sequence Similarity Clusters for the Entities in PDB 1D2E

Entity #1 | Chains: A,B,C,D
ELONGATION FACTOR TU (EF-TU) protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 14688
95 % 1 2 13904 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.9
PDBFlex
90 % 1 2 13684
70 % 1 2 12876
50 % 17 67 506
40 % 17 67 550
30 % 23 93 412

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures