Sequence Similarity Clusters for the Entities in PDB 1D2C

Entity #1 | Chains: A,B
PROTEIN (GLYCINE N-METHYLTRANSFERASE) protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 9 1398
95 % 3 14 1026 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 1.9
PDBFlex
90 % 3 16 980
70 % 3 16 1013
50 % 3 16 1058
40 % 3 16 1067
30 % 3 16 1048

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.