Sequence Similarity Clusters for the Entities in PDB 1D1Z

Entity #1 | Chains: A,B,C,D
SAP SH2 DOMAIN protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 8549
95 % 2 4 8587 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.9
PDBFlex
90 % 2 4 8514
70 % 2 4 8197
50 % 2 4 7526
40 % 5 159 214
30 % 7 239 160

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures