Sequence Similarity Clusters for the Entities in PDB 1D1Z

Entity #1 | Chains: A,B,C,D
SAP SH2 DOMAIN protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 9810
95 % 2 4 9888 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.9
PDBFlex
90 % 2 4 9767
70 % 2 4 9289
50 % 2 4 8405
40 % 4 134 229
30 % 7 231 150

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures