Sequence Similarity Clusters for the Entities in PDB 1D1Y

Entity #1 | Chains: A,B
BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN protein, length: 444 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 38 54 296
95 % 123 160 84 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.5
PDBFlex
90 % 123 160 87
70 % 123 160 105
50 % 409 499 8
40 % 480 577 11
30 % 480 577 23

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures