Sequence Similarity Clusters for the Entities in PDB 1D1Q

Entity #1 | Chains: A,B
TYROSINE PHOSPHATASE (E.C.3.1.3.48) protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39442
95 % 1 3 12844 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 1 3 12632
70 % 1 3 11894
50 % 1 3 10616
40 % 10 40 1094
30 % 12 49 800

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures