Sequence Similarity Clusters for the Entities in PDB 1D1M

Entity #1 | Chains: A,B
LAMBDA CRO REPRESSOR protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46832
95 % 2 4 14518 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 4 12 2654
70 % 4 12 2631
50 % 4 12 2599
40 % 5 13 2298
30 % 5 13 2201

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.