Sequence Similarity Clusters for the Entities in PDB 1D1M

Entity #1 | Chains: A,B
LAMBDA CRO REPRESSOR protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49181
95 % 2 4 15304 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 4 12 2806
70 % 4 12 2782
50 % 4 12 2747
40 % 5 13 2433
30 % 5 13 2320

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures