Sequence Similarity Clusters for the Entities in PDB 1D1K

Entity #1 | Chains: A,B,C,D,E
SHIGA-LIKE TOXIN I SUBUNIT B protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 3058
95 % 5 14 428 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.3
PDBFlex
90 % 5 14 467
70 % 5 14 499
50 % 9 22 333
40 % 9 22 365
30 % 9 22 369

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures