Sequence Similarity Clusters for the Entities in PDB 1D1K

Entity #1 | Chains: A,B,C,D,E
SHIGA-LIKE TOXIN I SUBUNIT B protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 16203
95 % 5 14 391 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.3
PDBFlex
90 % 5 14 426
70 % 5 14 450
50 % 9 21 322
40 % 9 21 342
30 % 9 21 350

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures