Sequence Similarity Clusters for the Entities in PDB 1D1I

Entity #1 | Chains: A,B,C,D,E
SHIGA TOXIN B-CHAIN protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 3848
95 % 3 14 412 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.3
PDBFlex
90 % 3 14 449
70 % 3 14 478
50 % 6 21 334
40 % 6 21 350
30 % 6 21 357

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures