Sequence Similarity Clusters for the Entities in PDB 1D0Q

Entity #1 | Chains: A,B
DNA PRIMASE protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40099
95 % 1 1 33826 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 32354
70 % 1 1 28887
50 % 1 1 24688
40 % 1 1 21699
30 % 1 1 18110

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures