Sequence Similarity Clusters for the Entities in PDB 1D0M

Entity #1 | Chains: A
35KD SOLUBLE LYTIC TRANSGLYCOSYLASE protein, length: 322 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 8 8505
95 % 7 8 8858 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 7 8 8779
70 % 7 8 8445
50 % 7 8 7690
40 % 8 10 5419
30 % 8 10 4865

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures