Sequence Similarity Clusters for the Entities in PDB 1D0M

Entity #1 | Chains: A
35KD SOLUBLE LYTIC TRANSGLYCOSYLASE protein, length: 322 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 8 8378
95 % 7 8 8726 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 7 8 8659
70 % 7 8 8343
50 % 7 8 7588
40 % 8 9 6278
30 % 8 9 5618

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.