Sequence Similarity Clusters for the Entities in PDB 1D0L

Entity #1 | Chains: A
35KD SOLUBLE LYTIC TRANSGLYCOSYLASE protein, length: 322 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 8 8820
95 % 3 8 9132 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 3 8 9051
70 % 3 8 8691
50 % 3 8 7910
40 % 4 10 5568
30 % 4 10 5001

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures