Sequence Similarity Clusters for the Entities in PDB 1D0K

Entity #1 | Chains: A
35KD SOLUBLE LYTIC TRANSGLYCOSYLASE protein, length: 322 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 10754
95 % 4 8 10438 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 4 8 10290
70 % 4 8 9738
50 % 4 8 8791
40 % 5 10 5685
30 % 5 10 5003

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures