Sequence Similarity Clusters for the Entities in PDB 1D0I

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
TYPE II 3-DEHYDROQUINATE HYDRATASE protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 482
95 % 4 7 539 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.5
PDBFlex
90 % 4 7 567
70 % 4 7 598
50 % 4 7 643
40 % 16 64 105
30 % 16 64 118

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures