Sequence Similarity Clusters for the Entities in PDB 1D0D

Entity #1 | Chains: A
ANTICOAGULANT PROTEIN protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 24491
95 % 1 4 20907 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.4
PDBFlex
90 % 1 4 20327
70 % 1 4 18654
50 % 1 4 16216
40 % 1 4 14469
30 % 1 4 12384
Entity #2 | Chains: B
PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 44 326
95 % 20 90 248 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 25 95 252
70 % 32 115 175
50 % 38 148 178
40 % 38 162 176
30 % 38 162 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.