Sequence Similarity Clusters for the Entities in PDB 1D09

Entity #1 | Chains: A,C
ASPARTATE CARBAMOYLTRANSFERASE CATALYTIC CHAIN protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34887
95 % 15 64 243 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.6
PDBFlex
90 % 15 65 254
70 % 16 67 275
50 % 17 71 264
40 % 20 79 241
30 % 49 142 133
Entity #2 | Chains: B,D
ASPARTATE CARBAMOYLTRANSFERASE REGULATORY CHAIN protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 56 211
95 % 10 59 276 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.9
PDBFlex
90 % 10 59 285
70 % 10 60 318
50 % 10 61 351
40 % 10 61 380
30 % 11 62 378

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.