Sequence Similarity Clusters for the Entities in PDB 1D09

Entity #1 | Chains: A,C
ASPARTATE CARBAMOYLTRANSFERASE CATALYTIC CHAIN protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35982
95 % 14 63 259 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.5
PDBFlex
90 % 14 64 268
70 % 15 66 284
50 % 16 70 276
40 % 19 78 249
30 % 48 141 138
Entity #2 | Chains: B,D
ASPARTATE CARBAMOYLTRANSFERASE REGULATORY CHAIN protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 56 216
95 % 10 59 286 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 1.9
PDBFlex
90 % 10 59 295
70 % 10 60 335
50 % 10 61 383
40 % 10 61 407
30 % 11 62 410

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.