Sequence Similarity Clusters for the Entities in PDB 1D02

Entity #1 | Chains: C,D
DNA (5'-D(*GP*CP*CP*AP*AP*TP*TP*GP*GP*C)-3') dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
TYPE II RESTRICTION ENZYME MUNI protein, length: 202 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 42222
95 % 1 1 32048
90 % 1 1 30644
70 % 1 1 27361
50 % 1 1 23342
40 % 1 1 20542
30 % 1 1 17404

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures