Sequence Similarity Clusters for the Entities in PDB 1CZ8

Entity #1 | Chains: V,W
Vascular endothelial growth factor A protein, length: 94 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 29 365
95 % 18 34 386
90 % 18 34 417
70 % 18 36 435
50 % 21 39 493
40 % 23 43 502
30 % 23 48 465
Entity #2 | Chains: L,X
LIGHT CHAIN OF NEUTRALIZING ANTIBODY protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39029
95 % 50 156 72
90 % 303 665 3
70 % 840 1803 2
50 % 2088 4435 1
40 % 2088 4435 1
30 % 2365 5225 1
Entity #3 | Chains: H,Y
HEAVY CHAIN OF NEUTRALIZING ANTIBODY protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37741
95 % 2 2 17291
90 % 2 2 16937
70 % 1013 2145 1
50 % 2089 4435 1
40 % 2089 4435 1
30 % 2366 5225 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.