Sequence Similarity Clusters for the Entities in PDB 1CZ8

Entity #1 | Chains: V,W
VASCULAR ENDOTHELIAL GROWTH FACTOR protein, length: 94 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 29 351
95 % 18 34 382
90 % 18 34 410
70 % 18 36 428
50 % 21 39 484
40 % 23 43 493
30 % 23 48 456
Entity #2 | Chains: L,X
LIGHT CHAIN OF NEUTRALIZING ANTIBODY protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38575
95 % 50 154 70
90 % 289 640 3
70 % 824 1765 2
50 % 2052 4337 1
40 % 2052 4337 1
30 % 2318 5109 1
Entity #3 | Chains: H,Y
HEAVY CHAIN OF NEUTRALIZING ANTIBODY protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38082
95 % 2 2 17004
90 % 2 2 16659
70 % 995 2096 1
50 % 2053 4337 1
40 % 2053 4337 1
30 % 2319 5109 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.