Sequence Similarity Clusters for the Entities in PDB 1CYN

Entity #1 | Chains: A
PEPTIDYL-PROLYL CIS-TRANS ISOMERASE B protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 21353
95 % 5 5 12346 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 5 5 12142
70 % 8 15 1767
50 % 122 223 108
40 % 128 241 126
30 % 130 251 130
Entity #2 | Chains: C
CYCLOSPORIN A protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.