Sequence Similarity Clusters for the Entities in PDB 1CYJ

Entity #1 | Chains: A
CYTOCHROME C6 protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 48630
95 % 1 2 36257 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 1 2 34612
70 % 1 2 30750
50 % 11 22 1187
40 % 14 25 1143
30 % 21 37 856

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4EIC 1 A Cytochrome c6 UNP Residues 25-117 32049
2 1CTJ 1 A CYTOCHROME C6 34112
3 4EID 1 A Cytochrome c6 UNP Residues 25-117 32049
4 3DR0 1 A, B, C Cytochrome c6 32049
5 1LS9 1 A CYTOCHROME C6 162068
6 3PH2 1 B Cytochrome c6 32059
7 3DMI 1 A cytochrome c6 2850
8 2ZBO 1 A, C, E, G, I, K Cytochrome c6 590727
9 1GDV 1 A CYTOCHROME C6 2788
10 4GYD 1 A, B, C, D, E, F Cytochrome c6 103690
11 1CYJ 1 A CYTOCHROME C6 3055
12 1CYI 1 A CYTOCHROME C6 3055
13 1C6R 1 A CYTOCHROME C6 REDUCED STATE (FE++) 3088
14 2V08 1 A, B CYTOCHROME C6 ZN, IMIDAZOLE AND CHLORIDE IONS PRESENT IN THE STRUCTURE 32059
15 4H0K 1 A, B Cytochrome c6 103690
16 4H0J 1 A, B, C, D, E, F Cytochrome c6 103690
17 1C6O 1 A, B CYTOCHROME C6 OXIDIZED STATE (FE+++) 3088
18 1F1F 1 A CYTOCHROME C6 129910
19 1KIB 1 A, B, C, D, E, F, G, H cytochrome c6 129910
20 1A2S 1 A CYTOCHROME C6 OXIDIZED FORM 34112
21 1C6S 1 A CYTOCHROME C6 REDUCED 32046
22 1CED 1 A CYTOCHROME C6 REDUCED 34112