Sequence Similarity Clusters for the Entities in PDB 1CYJ

Entity #1 | Chains: A
CYTOCHROME C6 protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 35572
95 % 1 2 30453 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 1 2 29191
70 % 1 2 26189
50 % 14 25 1183
40 % 18 29 1063
30 % 21 37 902

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4EIC 1 A Cytochrome c6 UNP Residues 25-117 32049
2 4EIF 1 A Cytochrome c6 UNP Residues 29-115 32049
3 4EIE 1 A Cytochrome c6 UNP Residues 29-115 32049
4 1CTJ 1 A CYTOCHROME C6 34112
5 4EID 1 A Cytochrome c6 UNP Residues 25-117 32049
6 3DR0 1 A, B, C Cytochrome c6 32049
7 1LS9 1 A CYTOCHROME C6 162068
8 4KMG 1 A Cytochrome C6 (Soluble cytochrome F) (Cytochrome c553) 84588
9 3PH2 1 B Cytochrome c6 32059
10 3DMI 1 A cytochrome c6 2850
11 2ZBO 1 A, C, E, G, I, K Cytochrome c6 590727
12 1GDV 1 A CYTOCHROME C6 2788
13 4GYD 1 A, B, C, D, E, F Cytochrome c6 103690
14 1CYJ 1 A CYTOCHROME C6 3055
15 1CYI 1 A CYTOCHROME C6 3055
16 1C6R 1 A CYTOCHROME C6 REDUCED STATE (FE++) 3088
17 2V08 1 A, B CYTOCHROME C6 ZN, IMIDAZOLE AND CHLORIDE IONS PRESENT IN THE STRUCTURE 32059
18 4H0K 1 A, B Cytochrome c6 103690
19 4H0J 1 A, B, C, D, E, F Cytochrome c6 103690
20 1C6O 1 A, B CYTOCHROME C6 OXIDIZED STATE (FE+++) 3088
21 1F1F 1 A CYTOCHROME C6 129910
22 1KIB 1 A, B, C, D, E, F, G, H cytochrome c6 129910
23 1A2S 1 A CYTOCHROME C6 OXIDIZED FORM 34112
24 1C6S 1 A CYTOCHROME C6 REDUCED 32046
25 1CED 1 A CYTOCHROME C6 REDUCED 34112