Sequence Similarity Clusters for the Entities in PDB 1CYJ

Entity #1 | Chains: A
CYTOCHROME C6 protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 47642
95 % 1 2 35569 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 1 2 33988
70 % 1 2 30230
50 % 11 22 1161
40 % 14 25 1121
30 % 21 37 842

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4EIC 1 A Cytochrome c6 UNP Residues 25-117 32049
2 4EIF 1 A Cytochrome c6 UNP Residues 29-115 32049
3 4EIE 1 A Cytochrome c6 UNP Residues 29-115 32049
4 1CTJ 1 A CYTOCHROME C6 34112
5 4EID 1 A Cytochrome c6 UNP Residues 25-117 32049
6 3DR0 1 A, B, C Cytochrome c6 32049
7 1LS9 1 A CYTOCHROME C6 162068
8 4KMG 1 A Cytochrome C6 (Soluble cytochrome F) (Cytochrome c553) 84588
9 3PH2 1 B Cytochrome c6 32059
10 3DMI 1 A cytochrome c6 2850
11 2ZBO 1 A, C, E, G, I, K Cytochrome c6 590727
12 1GDV 1 A CYTOCHROME C6 2788
13 4GYD 1 A, B, C, D, E, F Cytochrome c6 103690
14 1CYJ 1 A CYTOCHROME C6 3055
15 1CYI 1 A CYTOCHROME C6 3055
16 1C6R 1 A CYTOCHROME C6 REDUCED STATE (FE++) 3088
17 2V08 1 A, B CYTOCHROME C6 ZN, IMIDAZOLE AND CHLORIDE IONS PRESENT IN THE STRUCTURE 32059
18 4H0K 1 A, B Cytochrome c6 103690
19 4H0J 1 A, B, C, D, E, F Cytochrome c6 103690
20 1C6O 1 A, B CYTOCHROME C6 OXIDIZED STATE (FE+++) 3088
21 1F1F 1 A CYTOCHROME C6 129910
22 1KIB 1 A, B, C, D, E, F, G, H cytochrome c6 129910
23 1A2S 1 A CYTOCHROME C6 OXIDIZED FORM 34112
24 1C6S 1 A CYTOCHROME C6 REDUCED 32046
25 1CED 1 A CYTOCHROME C6 REDUCED 34112