Sequence Similarity Clusters for the Entities in PDB 1CYJ

Entity #1 | Chains: A
CYTOCHROME C6 protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 42878
95 % 1 2 29881 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 1 2 28661
70 % 1 2 25739
50 % 14 25 1214
40 % 18 29 1081
30 % 21 37 927

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4EIC 1 A Cytochrome c6 UNP Residues 25-117 32049
2 4EIF 1 A Cytochrome c6 UNP Residues 29-115 32049
3 4EIE 1 A Cytochrome c6 UNP Residues 29-115 32049
4 1CTJ 1 A CYTOCHROME C6 34112
5 4EID 1 A Cytochrome c6 UNP Residues 25-117 32049
6 3DR0 1 A, B, C Cytochrome c6 32049
7 2CE0 1 A CYTOCHROME C6 HEME GROUP AND DISULPHIDE BOND BETWEEN C67 AND C73 CYTOCHROME C6, RESIDUES 71-175 3702
8 1LS9 1 A CYTOCHROME C6 162068
9 4KMG 1 A Cytochrome C6 (Soluble cytochrome F) (Cytochrome c553) 84588
10 2CE1 1 A CYTOCHROME C6 HEME GROUP AND DISULPHIDE BOND BETWEEN C67 AND C73 CYTOCHROME C6, RESIDUES 71-175 3702
11 3PH2 1 B Cytochrome c6 32059
12 3DMI 1 A cytochrome c6 2850
13 2DGE 1 A, B, C, D Cytochrome c6 3702
14 2ZBO 1 A, C, E, G, I, K Cytochrome c6 590727
15 1GDV 1 A CYTOCHROME C6 2788
16 2V07 1 A CYTOCHROME C6 DISULPHIDE BOND BETWEEN C67 AND C73 CYTOCHROME C6A, RESIDUES 71-175 3702
17 4GYD 1 A, B, C, D, E, F Cytochrome c6 103690
18 1CYJ 1 A CYTOCHROME C6 3055
19 1CYI 1 A CYTOCHROME C6 3055
20 1C6R 1 A CYTOCHROME C6 REDUCED STATE (FE++) 3088
21 2V08 1 A, B CYTOCHROME C6 ZN, IMIDAZOLE AND CHLORIDE IONS PRESENT IN THE STRUCTURE 32059
22 4H0K 1 A, B Cytochrome c6 103690
23 4H0J 1 A, B, C, D, E, F Cytochrome c6 103690
24 1C6O 1 A, B CYTOCHROME C6 OXIDIZED STATE (FE+++) 3088
25 1F1F 1 A CYTOCHROME C6 129910
26 1KIB 1 A, B, C, D, E, F, G, H cytochrome c6 129910
27 1A2S 1 A CYTOCHROME C6 OXIDIZED FORM 34112
28 1C6S 1 A CYTOCHROME C6 REDUCED 32046
29 1CED 1 A CYTOCHROME C6 REDUCED 34112