Sequence Similarity Clusters for the Entities in PDB 1CYJ

Entity #1 | Chains: A
CYTOCHROME C6 protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 42798
95 % 1 2 29819 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 1 2 28602
70 % 1 2 25689
50 % 14 25 1213
40 % 18 29 1081
30 % 21 37 924

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4EIC 1 A Cytochrome c6 UNP Residues 25-117 32049
2 4EIF 1 A Cytochrome c6 UNP Residues 29-115 32049
3 4EIE 1 A Cytochrome c6 UNP Residues 29-115 32049
4 1CTJ 1 A CYTOCHROME C6 34112
5 4EID 1 A Cytochrome c6 UNP Residues 25-117 32049
6 3DR0 1 A, B, C Cytochrome c6 32049
7 2CE0 1 A CYTOCHROME C6 HEME GROUP AND DISULPHIDE BOND BETWEEN C67 AND C73 CYTOCHROME C6, RESIDUES 71-175 3702
8 1LS9 1 A CYTOCHROME C6 162068
9 4J20 1 A, B Cytochrome c-555 UNP residues 21-108 1097
10 3CU4 1 A Cytochrome c family protein 35554
11 4KMG 1 A Cytochrome C6 (Soluble cytochrome F) (Cytochrome c553) 84588
12 2CE1 1 A CYTOCHROME C6 HEME GROUP AND DISULPHIDE BOND BETWEEN C67 AND C73 CYTOCHROME C6, RESIDUES 71-175 3702
13 3PH2 1 B Cytochrome c6 32059
14 3DMI 1 A cytochrome c6 2850
15 2DGE 1 A, B, C, D Cytochrome c6 3702
16 2ZBO 1 A, C, E, G, I, K Cytochrome c6 590727
17 1GDV 1 A CYTOCHROME C6 2788
18 2V07 1 A CYTOCHROME C6 DISULPHIDE BOND BETWEEN C67 AND C73 CYTOCHROME C6A, RESIDUES 71-175 3702
19 4GYD 1 A, B, C, D, E, F Cytochrome c6 103690
20 5B6Q 1 A, B Soluble cytochrome cA 60217
21 1CYJ 1 A CYTOCHROME C6 3055
22 1CYI 1 A CYTOCHROME C6 3055
23 1C6R 1 A CYTOCHROME C6 REDUCED STATE (FE++) 3088
24 2V08 1 A, B CYTOCHROME C6 ZN, IMIDAZOLE AND CHLORIDE IONS PRESENT IN THE STRUCTURE 32059
25 4H0K 1 A, B Cytochrome c6 103690
26 4H0J 1 A, B, C, D, E, F Cytochrome c6 103690
27 1C6O 1 A, B CYTOCHROME C6 OXIDIZED STATE (FE+++) 3088
28 1F1F 1 A CYTOCHROME C6 129910
29 1CC5 1 A CYTOCHROME C5 354
30 1KIB 1 A, B, C, D, E, F, G, H cytochrome c6 129910
31 5MCS 1 A Lipoprotein cytochrome c, 1 heme-binding site 35554
32 1KX7 1 A mono-heme c-type cytochrome ScyA 24
33 1KX2 1 A mono-heme c-type cytochrome ScyA 24
34 1A2S 1 A CYTOCHROME C6 OXIDIZED FORM 34112
35 1C6S 1 A CYTOCHROME C6 REDUCED 32046
36 1GKS 1 A CYTOCHROME C551 1053
37 1CED 1 A CYTOCHROME C6 REDUCED 34112