Sequence Similarity Clusters for the Entities in PDB 1CY5

Entity #1 | Chains: A
PROTEIN (APOPTOTIC PROTEASE ACTIVATING FACTOR 1) protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 3301
95 % 1 9 3603 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.7
PDBFlex
90 % 1 9 3669
70 % 1 9 3613
50 % 1 9 3513
40 % 1 9 3373
30 % 1 9 3111

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures