Sequence Similarity Clusters for the Entities in PDB 1CXU

Entity #1 | Chains: A
PROTEIN (AVIAN SARCOMA VIRUS INTEGRASE) protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 17 3038
95 % 4 21 2846 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.2
PDBFlex
90 % 4 21 2890
70 % 4 21 2852
50 % 4 21 2809
40 % 4 21 2772
30 % 4 21 2596

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.