Sequence Similarity Clusters for the Entities in PDB 1CVW

Entity #1 | Chains: L
COAGULATION FACTOR VIIA (LIGHT CHAIN) (DES-GLA) protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 26 30 1376
95 % 26 30 1849 Flexibility: No
Max RMSD: 1.8, Avg RMSD: 0.3
PDBFlex
90 % 26 30 1896
70 % 26 30 1923
50 % 26 30 1931
40 % 95 118 443
30 % 95 118 443
Entity #2 | Chains: H
COAGULATION FACTOR VIIA (HEAVY CHAIN) (DES-GLA) protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 73 97 259
95 % 75 101 349 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 0.7
PDBFlex
90 % 75 101 374
70 % 75 101 411
50 % 75 101 488
40 % 1357 1669 4
30 % 1464 1811 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.