Sequence Similarity Clusters for the Entities in PDB 1CVW

Entity #1 | Chains: L
COAGULATION FACTOR VIIA (LIGHT CHAIN) (DES-GLA) protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 26 30 1429
95 % 26 30 1918
90 % 26 30 1963
70 % 26 30 1987
50 % 26 30 1991
40 % 95 118 458
30 % 95 118 457
Entity #2 | Chains: H
COAGULATION FACTOR VIIA (HEAVY CHAIN) (DES-GLA) protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 73 97 270
95 % 75 101 361 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 0.7
PDBFlex
90 % 75 101 385
70 % 75 101 422
50 % 75 101 502
40 % 1371 1685 4
30 % 1479 1834 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.